BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029B12LP1|AL429025
(908 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig163 1741 0.0
>3x_Contig163
Length = 1048
Score = 1741 bits (877), Expect = 0.0
Identities = 899/905 (99%), Gaps = 2/905 (0%)
Strand = Plus / Minus
Query: 1 gatccaattcatcgtggtaccgtaactttgtgccacacccacggtctctggatgcgaaas 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 gatccaattcatcgtggtaccgtaactttgtgccacacccacggtctctggatgcgaaag 925
Query: 61 -tcgctgataatcaaaaatggaatcggacctaaccct-ccagcaaatgcggtgatgtata 118
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 924 ctcgcttttaatcaaaaatggaatcggacctaacccttccagcaaatgcggtgatgtata 865
Query: 119 gaatcacaaatataactagtatcattggtgcattacctacgataccgaaacatatcataa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gaatcacaaatataactagtatcattggtgcattacctacgataccgaaacatatcataa 805
Query: 179 aggaacatattgacatcagcgttgatgaggagatcaatagtggttttctaccccaatggt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aggaacatattgacatcagcgttgatgaggagatcaatagtggttttctaccccaatggt 745
Query: 239 ccaccaatggagatgaaaagaaagtcattaatacatttacaatcgaaatggcaaaattaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccaccaatggagatgaaaagaaagtcattaatacatttacaatcgaaatggcaaaattaa 685
Query: 299 tgatgattgcagtatcagggaatgccttctttatcactttgacaccataaaatacaattg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgatgattgcagtatcagggaatgccttctttatcactttgacaccataaaatacaattg 625
Query: 359 aatttataccacaaaattgttgagccattaatatagttgtgatgactcttcttgggtact 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatttataccacaaaattgttgagccattaatatagttgtgatgactcttcttgggtact 565
Query: 419 tgtacttcggatccttccagtattcaacaacggttatcgattccgaatctctcaacgaag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtacttcggatccttccagtattcaacaacggttatcgattccgaatctctcaacgaag 505
Query: 479 atctcgtagatgacggtctctccaagttcaaattggaccccagattcatctgagagttcg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atctcgtagatgacggtctctccaagttcaaattggaccccagattcatctgagagttcg 445
Query: 539 tatgagcttctaaatcactaaacgtcctcaccggttgcgacccttgcaaccaaccatcaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatgagcttctaaatcactaaacgtcctcaccggttgcgacccttgcaaccaaccatcaa 385
Query: 599 tctcctgtctagactcctgccgagagttgccacgtaattgtgataaaacatcctctgcgt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctcctgtctagactcctgccgagagttgccacgtaattgtgataaaacatcctctgcgt 325
Query: 659 ctgtyatgttccctttagaaacgagccatcttggtgactcgtttattctgaacaagagac 718
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgtcatgttccctttagaaacgagccatcttggtgactcgtttattctgaacaagagac 265
Query: 719 caaaatttagtaaagagattaacccaccgaacagaagaatccatctccattgcaacatgt 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caaaatttagtaaagagattaacccaccgaacagaagaatccatctccattgcaacatgt 205
Query: 779 tagcccataacatagctaaagactgtgtcactagaatcccacagtttatacttacttgat 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tagcccataacatagctaaagactgtgtcactagaatcccacagtttatacttacttgat 145
Query: 839 tcatagatcctaaagaccctttcaaatgtaccggtgacatctcattgataaacaatggag 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcatagatcctaaagaccctttcaaatgtaccggtgacatctcattgataaacaatggag 85
Query: 899 tgaca 903
|||||
Sbjct: 84 tgaca 80
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5946
Number of Sequences: 1807
Number of extensions: 5946
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 908
length of database: 10,358,551
effective HSP length: 16
effective length of query: 892
effective length of database: 10,329,639
effective search space: 9214037988
effective search space used: 9214037988
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)